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- Duca Research Group, Virginia Bioinformatics Institure, Virginia Tech
Dr. Duca’s research program addresses understanding, detecting, and treating infectious diseases caused by viral pathogens. The main focus centers on innate immunity, specifically interferon-activated host responses.
https://www.vbi.vt.edu/article/articleview/136
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Bioinformatics Core - Washington State University
The WSU Bioinformatics Core is a multidisciplinary service center that assists research projects in bioinformatics and allied fields such as genomics and proteomics. Bioinformatics Core services can be accessed through the WSU bioinformatics web site, with links to the servers, software packages and WWW mirror sites for DNA/protein analysis.
http://www.bioinformatics.wsu.edu
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Genomatix - understanding gene regulation
Genomatix offers software, databases and services aimed at understanding gene regulation at the molecular level. We combine sequence analysis, genome annotation and literature mining to help you discover new contexts from your biological data. Our team has more than 10 years of scientific expertise in the successful application of computer aided analysis of gene regulatory networks. More than 15,000 researchers in industry and academia around the world use our tools.
http://www.genomatix.de
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DNASIS MAX - Hitachi Software Engineering Europe AG
With DNASIS MAX, Hitachi Software provides a fully integrated program that not only includes a wide range of standard sequence analysis features, but that is also the only commercially available solution for automated, customisable sequence analysis.
http://www.hitachisoft-bio.com/products/dnasis_max/default.h...
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Bioinformatics Group @ Lund University Centre for Mathematical Sciences
Homepage: including all kinds of information on the local (Lund), national (Sweden), and international level.
http://www.maths.lth.se/bioinformatics/
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Slicer Dicer Volume Data Visualization Software
Volumetric data visualization software - Slicer Dicer - fast, powerful, and easy-to-use. Now paired with PIXOTEC's DICOM browser Seeker. With Slicer Dicer you can roam visually through your data, viewing arbitrary orthogonal and oblique slices, rectilinear blocks and cutouts, isosurfaces, and projected volumes.
http://www.slicerdicer.com
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Systems Biology Software
This develop simulation, model entry and model analysis software for the systems biology comnunity. It is the current home of the Systems Biology Workbench
http://www.sys.bio.org
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Wise Technologies Ltd.
Image analysis, signal acquisition and processing. Wise Technologies Ltd. develops software for research organizations.
http://www.wise-t.com
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DNA-Star - Lasergene
Commercial sequence analysis and manipulation suite for Windows and Macintosh.
http://www.dnastar.com/
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Bionconductor
The Bioconductor project produces an open source software framework that will assist biologists and statisticians working in bioinformatics, with primary emphasis on inference using DNA microarrays, built mostly using R.
http://www.bioconductor.org/
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The Sanger Centre: Software
Production software used at the Sanger Centre, physical mapping software, informatics and analysis software, and data formats
http://www.sanger.ac.uk/Software/
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Software for Statistical Folding and Rational Design of Nucleic Acids
Sfold predicts probable RNA secondary structures, assesses target accessibility, and provides tools for the rational design of RNA-targeting nucleic acids. The web server version is free for academic use.
http://sfold.wadsworth.org/index.pl
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AG BIODV Software
Links to software developed by the AG BIODV group. Tools for consensus, alignment and definition. Both downloads and executables.
http://www.gsf.de/biodv/software.html
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